comparison bin/do_idx.sh @ 103:7d58dc01f329

re-instate logging splits for .idx
author Henry S. Thompson <ht@inf.ed.ac.uk>
date Wed, 13 Sep 2023 12:40:39 +0100
parents e2e64c3d763e
children 9403c02d5034
comparison
equal deleted inserted replaced
102:e606c609f813 103:7d58dc01f329
1 #!/bin/bash 1 #!/bin/bash
2 export res="$1" 2 export res="$1"
3 orig="$2" 3 orig="$2"
4 merge_date.py -d <(LC_ALL=C sort -m -k1,2 -s $res/ks_[0-9]*.tsv) $orig $res/idx # | \ 4 merge_date.py <(LC_ALL=C sort -m -k1,2 -s $res/ks_[0-9]*.tsv) $orig $res/idx |\
5 exit
6 tee /dev/stderr | \
7 parallel -j 10 'echo {#} {} >$res/merge_{#}.log 5 parallel -j 10 'echo {#} {} >$res/merge_{#}.log
8 echo $(date) {#} {} 6 echo $(date) {#} {}
9 export res 7 export res
10 split -l 3000 --filter="igzip -c | \ 8 split -l 3000 --filter="igzip -c | \
11 tee >(wc -c >> \ 9 tee >(wc -c >> \