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annotate plinksJob.sh @ 185:acae526510e2

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too many overdue updates to break down
author Henry S. Thompson <ht@inf.ed.ac.uk>
date Wed, 06 Dec 2023 13:38:58 +0000
parents 29263ba42361
children
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65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
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1 #!/bin/bash
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29263ba42361 add args for start tar and number of tars
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2 # Usage: qsub -v t1=1stTar,tn=numTars plinksJob.sh
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3 #PBS -l select=2:ncpus=36
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4 #PBS -l place=exclhost
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5 #PBS -l walltime=08:00:00
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6 #PBS -V
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7 #PBS -A dc007
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8 #PBS -N plinks
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b0d9fe66ce8a give up on mpiexec_mpt
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10 #module load mpt
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12 cd ${PBS_O_WORKDIR}
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29263ba42361 add args for start tar and number of tars
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13 ((n1=tn/2))
29263ba42361 add args for start tar and number of tars
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14 ((s1=t1))
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15 ((s2=t1+n1))
29263ba42361 add args for start tar and number of tars
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16 ((e1=s2-1))
29263ba42361 add args for start tar and number of tars
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17 ((e2=s1+tn-1))
29263ba42361 add args for start tar and number of tars
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18 echo $(seq --format="%03.0f" $s1 $e1),$(seq --format="%03.0f" $s2 $e2)
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29263ba42361 add args for start tar and number of tars
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20 bin/plinksMaster.sh $s1 $e1 $s2 $e2
29263ba42361 add args for start tar and number of tars
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