diff plinksJob.sh @ 11:b0d9fe66ce8a

give up on mpiexec_mpt
author Henry S. Thompson <ht@inf.ed.ac.uk>
date Tue, 25 Feb 2020 18:33:22 +0000
parents 3b56c2c9d0ee
children 29263ba42361
line wrap: on
line diff
--- a/plinksJob.sh	Tue Feb 25 14:56:36 2020 +0000
+++ b/plinksJob.sh	Tue Feb 25 18:33:22 2020 +0000
@@ -6,12 +6,8 @@
 #PBS -A dc007
 #PBS -N plinks
 
-module load mpt
+#module load mpt
 
 cd ${PBS_O_WORKDIR}
+bin/plinksMaster.sh
 
-export MPI_SHEPHERD=true
-#export MPI_UNBUFFERED_STDIO=true not needed anymore since debug logging pruned
-
-mpiexec_mpt -ppn 1 -n 2 bin/plinks.sh 2019-35
-