Mercurial > hg > cc > cirrus_work
changeset 25:50337cd1d16f
framework for stats over results of rank correlations
| author | Henry S. Thompson <ht@inf.ed.ac.uk> |
|---|---|
| date | Mon, 14 Nov 2022 18:52:35 +0000 |
| parents | e6adf484ebb4 |
| children | 5c5440e7854a |
| files | bin/spearman.py |
| diffstat | 1 files changed, 13 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/bin/spearman.py Mon Nov 14 18:52:35 2022 +0000 @@ -0,0 +1,13 @@ +#!/usr/bin/env python3 +import numpy as np +from numpy import loadtxt +from scipy import stats +import statsmodels.api as sm +import pylab + +import sys + +cc19=loadtxt(sys.argv[1],delimiter=',') +cc19s_o=stats.spearmanr(cc19,nan_policy='omit') +cc19s_x=np.array([np.concatenate((cc19s_o.correlation[i][1:i],cc19s_o.correlation[i][i+1:])) for i in range(1,101)]) +