Mercurial > hg > cc > cirrus_work
view bin/spearman.py @ 25:50337cd1d16f
framework for stats over results of rank correlations
author | Henry S. Thompson <ht@inf.ed.ac.uk> |
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date | Mon, 14 Nov 2022 18:52:35 +0000 |
parents | |
children | 5c5440e7854a |
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#!/usr/bin/env python3 import numpy as np from numpy import loadtxt from scipy import stats import statsmodels.api as sm import pylab import sys cc19=loadtxt(sys.argv[1],delimiter=',') cc19s_o=stats.spearmanr(cc19,nan_policy='omit') cc19s_x=np.array([np.concatenate((cc19s_o.correlation[i][1:i],cc19s_o.correlation[i][i+1:])) for i in range(1,101)])