--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/bin/_runme.sh	Mon Jul 18 19:22:42 2022 +0100
@@ -0,0 +1,54 @@
+#!/bin/bash
+# This runs on the compute nodes...
+# Args: wd [-b CMDS] [-i input] CMDS
+
+N=$SLURM_JOB_NUM_NODES
+n=$SLURM_NTASKS
+c=$SLURM_CPUS_PER_TASK
+nodename=$SLURMD_NODENAME
+local=$SLURM_LOCALID
+node=$SLURM_NODEID
+task=$SLURM_PROCID
+
+cd "$1"
+shift
+
+threadsPerTask=2
+pjobs=$((c / $threadsPerTask))
+
+echo $(date) task $n.$task on $nodename:$N.$node start $(pwd) 1>&2
+
+PATH=$W/$USER/bin:$W/shared/bin:$PATH
+export task PATH n
+
+if [ "$1" = "-b" ]
+then
+  shift
+  eval "$1"
+  shift
+fi
+
+if [ "$1" = "-i" ]
+then
+ shift
+ input="$1"
+ shift
+fi
+
+export cmd="$1"
+shift
+
+doit () {
+ arg="$1"
+ echo $(date) start $task $PARALLEL_SEQ $arg
+ eval "$cmd"
+ echo $(date) end $task $PARALLEL_SEQ
+}
+
+export -f doit
+
+eval "$input" | \
+   parallel -j $pjobs doit '{}'
+
+echo $(date) task $n.$task on $nodename:$N.$node end 1>&2
+