Mercurial > hg > cc > cirrus_work
comparison bin/spearman.py @ 25:50337cd1d16f
framework for stats over results of rank correlations
| author | Henry S. Thompson <ht@inf.ed.ac.uk> |
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| date | Mon, 14 Nov 2022 18:52:35 +0000 |
| parents | |
| children | 5c5440e7854a |
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| 24:e6adf484ebb4 | 25:50337cd1d16f |
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| 1 #!/usr/bin/env python3 | |
| 2 import numpy as np | |
| 3 from numpy import loadtxt | |
| 4 from scipy import stats | |
| 5 import statsmodels.api as sm | |
| 6 import pylab | |
| 7 | |
| 8 import sys | |
| 9 | |
| 10 cc19=loadtxt(sys.argv[1],delimiter=',') | |
| 11 cc19s_o=stats.spearmanr(cc19,nan_policy='omit') | |
| 12 cc19s_x=np.array([np.concatenate((cc19s_o.correlation[i][1:i],cc19s_o.correlation[i][i+1:])) for i in range(1,101)]) | |
| 13 |