changeset 85:e5d5958bf3fe

minor
author Henry S. Thompson <ht@inf.ed.ac.uk>
date Mon, 15 Mar 2021 14:20:00 +0000
parents 2fc33145242b
children b5fef78cbb26
files bin/masterMaster.sh masterJob.sh
diffstat 2 files changed, 8 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/bin/masterMaster.sh	Sun Mar 14 21:28:02 2021 +0000
+++ b/bin/masterMaster.sh	Mon Mar 15 14:20:00 2021 +0000
@@ -1,10 +1,11 @@
 #!/bin/bash
-# This runs on login machine to launch the real task (named by $1) on two machines
+# This runs on login machine to launch the real task (named by $1) on multiple machines
 # Any further args are passed to $task.sh
 echo $(date) Launching master workers for "$@" from $(hostname)
 task=$1
 shift
+srun $HOME/bin/$task.sh "$@"
+echo $(date) $task "$@" workers done
+
 #nodes=($(scontrol show hostname "$SLURM_JOB_NODELIST"))
 #seq 1 -1 0 | $HOME/gentoo/usr/bin/parallel --will-cite --joblog master_$task.log -S "ssh -o StrictHostKeyChecking=accept-new ${nodes[1]}" -S "ssh -o StrictHostKeyChecking=accept-new  ${nodes[0]}" -N 1 --workdir /dev/shm --transferfile ${task}_'{}'.txt $* $HOME/bin/$task.sh '{}' "$@"
-srun $HOME/bin/$task.sh "$@"
-echo $(date) $task "$@" workers done
--- a/masterJob.sh	Sun Mar 14 21:28:02 2021 +0000
+++ b/masterJob.sh	Mon Mar 15 14:20:00 2021 +0000
@@ -5,11 +5,13 @@
 #   Use -n n -c c for to launch n 'parallel ...' jobs each of which spawns c actual workers which
 #    divide up the job task file task file (see below) between them.
 # Implies that ~/taskName_{0..n}.txt or ~/taskName/{0..n}.txt contain the necessary parameterisation
-#SBATCH --time=00:01:00
+#SBATCH --time=01:00:00
 #SBATCH --partition=standard
 #SBATCH --qos=standard
 #SBATCH --account=dc007
-#SBATCH --job-name stest
+#SBATCH --job-name master
+
+export SBATCH_JOB_NAME="$1"
 
 cd ${SLURM_SUBMIT_DIR}