view bin/doExtract.sh @ 33:4c23b1766692

towards sub-division of resulting tar files
author Henry S. Thompson <ht@inf.ed.ac.uk>
date Tue, 24 Mar 2020 17:53:35 +0000
parents 1e479e3ea9c4
children ec99b2d1d2fc
line wrap: on
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#!/bin/bash
# Usage doExtract.sh ccid jobid segid
ccid=$1
export jobid=$2
segid=$3
echo $(date) $(hostname) $jobid $segid
mkdir -p $segid/logs
cd $segid
ls /beegfs/common_crawl/CC-MAIN-${ccid}/${segid}/CC-MAIN-*.warc.gz | \
parallel --joblog job_${jobid}.log -j 18 -N 1 'id=$(echo {} | cut -f 6 -d / | cut -f 3- -d - | cut -f 1 -d .) ; \
    echo starting $id $(date) >> logs/${jobid}_{#}_log ; \
    unpigz -dp 1 -c {} | $HOME/lib/valhalla/bin/warc.sh ${id} application/pdf 2>> logs/${jobid}_{#}_log ; \
    echo finished ${id} $(date) >> logs/${jobid}_{#}_log'
res=$?
echo $(date) $(hostname) $jobid $segid $res
if [ $res = 0 ]
 then
  cat ../by11s.txt | while read 
  tar -cf /beegfs/common_crawl/CC-MAIN-${ccid}/${segid}/extracts.tar * && 
  echo $(date) $(hostname) $jobid /beegfs/common_crawl/CC-MAIN-${ccid}/${segid}/extracts.tar
fi