view bin/test.sh @ 147:11d973ecff4e

change test to use Master
author Henry S. Thompson <ht@inf.ed.ac.uk>
date Mon, 25 Oct 2021 15:05:25 +0000
parents a9a9f6f1832e
children 3213a8bb2ed1
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#!/usr/bin/bash
# Invoke this as e.g. sbatch --time=00:05:00 [--exclusive] -N 2 --ntasks-per-node 2 -c 2 masterJob.sh test
# run doTest.sh in parallel on 2 nodes, 2 tasks each, with input from test/n.t.txt
n=$SLURM_NTASKS
c=$SLURM_CPUS_PER_TASK
nodename=$SLURMD_NODENAME
task=$SLURM_LOCALID
node=$SLURM_NODEID
echo $(date) $nodename:$node:$task start

#type parallel
#module load gnu-parallel

export PYTHONPATH=$PYTHONPATH:$HOME/lib/python
parallel --will-cite -j $c dotest.sh $node $task '{}' < test.$node.$task.txt

echo $(date) $nodename:$node:$task end