annotate plinksJob.sh @ 5:a28d731977da

merge
author Henry S. Thompson <ht@inf.ed.ac.uk>
date Wed, 19 Feb 2020 10:41:59 +0000
parents 65a56c0d1c1f
children 25ca3505b4d7
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
1 #!/bin/bash
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
2 #PBS -l select=2:ncpus=36
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
3 #PBS -l place=exclhost
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
4 #PBS -l walltime=08:00:00
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
5 #PBS -V
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
6 #PBS -A dc007
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
7 #PBS -N plinks
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
8
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
9 module load mpt
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
10
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
11 cd ${PBS_O_WORKDIR}
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
12
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
13 export MPI_SHEPHERD=true
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
14
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
15 mpiexec_mpt -ppn 1 -n 2 bin/plinks.sh 2019-35
65a56c0d1c1f bolting the barn door...
Henry S. Thompson <ht@inf.ed.ac.uk>
parents:
diff changeset
16